88. Nakagami S, Wang Z, Han X, Tsuda K*: Regulation of Bacterial Growth and Behavior by Host Plant. Annual Review of Phytopathology, 62: 69-96 (2024)

87. Liu X, Igarashi D, Hillmer RA, Stoddard T, Lu Y, Tsuda K, Myers CL, Katagiri F: Decomposition of dynamic transcriptomic responses during effector-triggered immunity reveals conserved responses in two distinct plant cell populations. Plant Communications, 5: 100882 (2024)  

86. Wang D, Wei L, Ma J, Wan Y, Huang K, Sun Y, Wen H, Chen Z, Li Z, Yu D, Cui H, Wu J, Wu Y, Tae Kim S, Zhao J, Parker JE, Tsuda K*, Jiang C*, Wang Y*: Bacillus cereus NJ01 induces SA- and ABA-mediated immunity against bacterial pathogens through the EDS1-WRKY18 module. Cell Reports, 43: 113985 (2024)

85. Jian Y, Gong D, Wang Z, Liu L, He J, Han X, Tsuda K*: How plants manage pathogen infection. EMBO Reports, 25: 31-44 (2024)

84. Entila F, Han X, Mine A, Schulze-Lefert P, Tsuda K*: Commensal lifestyle regulated by a negative feedback loop between Arabidopsis ROS and the bacterial T2SS. Nature Communications, 15: 456 (2024)

83. Zhao X, Wang Y, Yuan B, Zhao H, Wang Y, Tan Z, Wang Z, Wu H, Li G, Song W, Gupta R, Tsuda K, Ma Z, Gao X, Gu Q: Temporally-coordinated bivalent histone modifications of BCG1 enable fungal invasion and immune evasion. Nature Communications, 15: 231 (2024)  

82. Hillmer RA, Igarashi D, Stoddard T, Lu Y, Liu X, Tsuda K, Katagiri F: The Kinetics and Basal Levels of the Transcriptome Response During Effector-Triggered Immunity in Arabidopsis are mainly controlled by Four Immune Signaling Sectors. Journal of Bioinformatics and Systems Biology, 6: 347-363 (2023)  

81. Wang Y, Yu H, Xu Y, Wu M, Zhang J, Tsuda K, Liu S, Jiang D, Chen W, Wei Y, Li G, Yang L: Expression of a mycoparasite protease in plant petals suppresses the petal-mediated infection by necrotrophic pathogens. Cell Reports, 42: 113290 (2023)  

80. Han X, Tsuda K*: Divide and conquer: Spatiotemporal plant innate immunity at the single-cell resolution. Cell Host & Microbe, 31: 1601-1603 (2023)

79. Cao Y, Kümmel F, Logemann E, Gebauer JM, Lawson AW, Yu D, Uthoff M, Keller B, Jirschitzka J, Baumann U, Tsuda K, Chai J, Schulze-Lefert P: Structural polymorphisms within a common powdery mildew effector scaffold as a driver of coevolution with cereal immune receptors. Proceedings of the National Academy of Sciences USA, 120: e2307604120 (2023)

78. Wang D, Wei L, Liu T, Ma J, Huang K, Guo H, Huang Y, Zhang L, Zhao J, Tsuda K, Wang Y: Suppression of ETI by PTI priming to balance plant growth and defense through an MPK3/MPK6-WRKYs-PP2Cs module. Molecular Plant, 16: 903-918 (2023)

77. Saijo Y, Betsuyaku S, Toyota M, Tsuda K: A Continuous Extension of Plant Biotic Interactions Research. Plant Cell and Physiology, 63: 1321-1323 (2022)

76. Nobori T, Cao Yu, Entila F, Dahms E, Tsuda Y, Garrido-Oter R, Tsuda K*: Dissecting the co-transcriptome landscape of plants and their microbiota. EMBO Reports, 23: e55380 (2022)

75. Harris JM, Bede J, Tsuda K: Focus on the Role of the Abiotic Environment on Interactions Between Plants and Microbes. Mol Plant-Microbe Interact, 35: 510 (2022)

74. Omae N, Tsuda K*: Plant-Microbiota Interactions in Abiotic Stress Environments. Mol Plant-Microbe Interact, 35: 511-526 (2022)

73. Hou S, Tsuda K*: Salicylic acid and jasmonic acid crosstalk in plant immunity. Essays Biochem, EBC20210090 (2022)

72. Nakano M, Omae N, Tsuda K*: Inter-organismal phytohormone networks in plant-microbe interactions. Curr Opin Plant Biol, 68: 102258 (2022)

71. Samaradivakara SP, Chen H, Lu Y, Li P, Kim Y, Tsuda K, Mine A, Day B*: Overexpression of NDR1 leads to pathogen resistance at elevated temperatures. New Phytol, 235: 1146-1162 (2022)

70. Han X, Tsuda K*: Evolutionary footprint of plant immunity. Curr Opin Plant Biol, 67: 102209 (2022)

69. Tsuda K*: Editorial Feature: Meet the PCP Editor - Kenichi Tsuda. Plant Cell Physiol, 63: 1-3 (2022)

68. Jia Z, Han X, Tsuda K*: An Efficient Method for DNA Purification-Free PCR from Plant Tissue. Curr Protoc, 1: e289 (2021)

67. Takemura C, Senuma W, Hayashi K, Minami A, Terazawa Y, Kaneoka C, Sakata M, Chen M, Zhang Y, Nobori T, Sato M, Kiba A, Ohnishi K, Tsuda K, Kai K, Hikichi Y*: PhcQ mainly contributes to the regulation of quorum sensing-dependent genes, in which PhcR is partially involved, in Ralstonia pseudosolanacearum strain OE1-1, Mol Plant Pathol, 22: 1538-1552 (2021)

66. Jia Z, Ding M, Nakano M, Hong K, Huang R, Becker D, Glazebrook J, Katagiri F, Han X, Tsuda K*: DNA purification-free PCR from plant tissue, Plant Cell Physiol, 62: 1503-1505 (2021)

65. Winkelmüller TM, Entila F, Anver S, Piasecka A, Song B, Dahms E, Sakakibara H, Gan X, Kułak K, Sawikowska A, Krajewski P, Tsiantis M, Garrido-Oter R, Fukushima K, Schulze-Lefert P, Laurent S, Bednarek P, Tsuda K*: Gene expression evolution in pattern-triggered immunity within Arabidopsis thaliana and across Brassicaceae species. Plant Cell, 33: 1863-1887 (2021)

64. Yu P, He X Baer M, Beirinckx S, Tian T, Moya YAT, Zhang X, Deichmann M, Frey FP, Bresgen V, Li C, Razavi BS, Schaaf G, von Wiren N, Su Z, Bucher M, Tsuda K, Goormachtig S, Chen X*, Hochholdinger F*: Plant flavones enrich rhizosphere Oxalobacteraceae to improve maize performance under nitrogen deprivation. Nature Plants, 7: 481-499 (2021)

63. Lu Y, Tsuda K*: Intimate association of PRR- and NLR-mediated signaling in plant immunity. Mol Plant-Microbe Interact, 34: 3-14 (2021)

62. Nobori T, Wang Y, Wu J, Christina Stolze S, Tsuda T, Finkemeier I, Nakagami H, Tsuda K*: Multidimensional gene regulatory landscape of a bacterial pathogen in plants. Nature Plants, 6: 883-896 (2020)

61. Wang Y, Garrido-Oter R, Wu J, Winkelmuller TM, Agler M, Colby T, Nobori T, Kemen E, Tsuda K*: Site-specific cleavage of bacterial MucD by secreted proteases mediates antibacterial resistance in Arabidopsis. Nature Commun, 10: 2853 (2019)

60. Nobori T, Tsuda K*: The plant immune system in heterogeneous environments. Curr Opin Plant Biol, 50: 58-66 (2019)

59. Adachi H*, Tsuda K: Convergence of cell-surface and intracellular immune receptor signalling. New Phytol, 221: 1676-1678 (2019)

58. Uemura T*, Nakano RT, Takagi J, Wang Y, Kramer K, Finkemeier I, Nakagami H, Tsuda K, Ueda T, Schulze-Lefert P, Nakano A: A Golgi-released subpopulation of the trans-Golgi network mediates constitutive and pathogen-inducible protein secretion in Arabidopsis. Plant Physiol, 179: 519-532 (2019)

57. Berens ML, Wolinska KW, Spaepen S, Ziegler J, Nobori T, Nair A, Krüler V, Winkelmüller TM, Wang Y, Mine A, Becker D, Garido-Oter R, Schulze-Lefert P*, Tsuda K*: Balancing trade-offs between biotic and abiotic stress responses through leaf age-dependent variation in stress hormone crosstalk. Proceedings of the National Academy of Sciences USA, 116: 2364-2373 (2019)

56. Wang Y, Schuck S, Wu J, Yang P, Döring AC, Zeier J*, Tsuda K*: A MPK3/6-WRKY33-ALD1-Pipecolic acid Regulatory Loop Contributes to Systemic Acquired Resistance. Plant Cell, 10: 2480-2494 (2018)

55. Nobori T, Tsuda K*: In planta Transcriptome Analysis of Pseudomonas syringae. Bio-protocol, 8: 2987 (2018)

54. Mine A, Seyfferth C, Kracher B, Berens ML, Becker D, Tsuda K*: The Defense Phytohormone Signaling Network Enables Rapid, High-amplitude Transcriptional Reprogramming During Effector-Triggered Immunity. Plant Cell, 30: 1199-1219 (2018)

53. Nobori T, Mine A, Tsuda K*: Molecular networks in plant-pathogen holobiont. FEBS Lett, 592: 1937-1953 (2018)

52. Nobori T, Velásquez AC, Wu J, Kvitko BH, Kremer JM, Wang Y, He SY*, Tsuda K*: Transcriptome landscape of a bacterial pathogen under plant immunity. Proceedings of the National Academy of Sciences USA,115: E3055-E3064 (2018)

51. Jacob F, Kracher B, Mine A, Seyfferth C, Blanvillain-Baufume S, Parker JE, Tsuda K, Schulze-Lefert P*, Maekawa T*: A dominant-interfering camta3 mutation compromises primary transcriptional outputs mediated by both cell surface and intracellular immune receptors in Arabidopsis thaliana. New Phytol, 217: 1667-1680 (2018)

50. Tsuda K*: Division of Tasks: Defense by the Spatial Separation of Antagonistic Hormone Activities. Plant Cell Physiol, 59: 3-4 (2018)

49. Huot B, Castroverde CDM, Velásquez AC, Hubbard E, Pulman JA, Yao J, Childs KL, Tsuda K, Montgomery BL, He SY*: Dual impact of elevated temperature on plant defence and bacterial virulence in Arabidopsis. Nature Commun, 8: 1808 (2017)

48. Berens ML, Berry HM, Mine A, Argueso CT, Tsuda K*: Evolution of Hormone Signaling Networks in Plant Defense. Annu Rev Phytopathol, 55: 401-425 (2017)

47. Mine A, Berens ML, Nobori T, Anver S, Fukumoto K, Winkelmüller TM, Takeda A, Becker D, Tsuda K*: Pathogen exploitation of an abscisic acid- and jasmonate-inducible MAPK phosphatase and its interception by Arabidopsis immunity. Proceedings of the National Academy of Sciences USA, 114: 7456-7461 (2017)

46. Shigenaga AM, Berens ML, Tsuda K*, Argueso CT*: Towards Engineering of Hormonal Crosstalk in Plant Immunity. Curr Opin Plant Biol, 38: 164-172 (2017)

45. Hillmer R, Tsuda K, Rallapalli G, Asai S, Truman W, Papke MD, Sakakibara H, Jone JDG, Myers CL, Katagiri F*: The Highly Buffered Arabidopsis Immune Signaling Network Conceals the Functions of its Components. PLoS Genet, 13: e1006639 (2017)

44. Mine A, Nobori T, Salazar-Rondon MC, Winkelmüller TM, Anver S, Becker D, Tsuda K*: An incoherent feed-forward loop mediates robustness and tunability in a plant immune network. EMBO Rep, 18: 464-476 (2017)

43. Yamada K, Yamaguchi K, Shirakawa T, Nakagami H, Mine A, Ishikawa K, Fujiwara M, Narusaka M, Narusaka Y, Ichimura K, Kobayashi Y, Matsui H, Nomura Y, Nomoto M, Tada Y, Fukao Y, Fukamizo T, Tsuda K, Shirasu K, Shibuya N, Kawasaki T*: The CERK1-associated kinase PBL27 mediates chitin-triggered MAPK activation in Arabidopsis. EMBO J, 35: 2468-2483 (2016)

42. Stuttmann J*, Peine N, Garcia AV, Wagner C, Choudhury SR, Wang Y, James GV, Griebel T, Alcazar R, Tsuda K, Schneeberger K, Parker JE*: Arabidopsis thaliana DM2h (R8) within the Landsberg RPP1-like Resistance Locus Underlies Three Different Cases of EDS1-Conditioned Autoimmunity. PLoS Genet, 12: e1005990 (2016)

41. Wang Y, Wu J, Kim SG, Tsuda K, Gupta R, Park SY, Kim ST*, Kang KY*: Magnaporthe oryzae-Secreted Protein MSP1 Induces Cell Death and Elicits Defense Responses in Rice. Mol Plant-Microbe Interact, 29: 299-312 (2016)

40. Yamada K, Yamashita-Yamada M, Hirase T, Fujiwara T, Tsuda K, Hiruma K, Saijo Y*: Danger peptide receptor signaling in plants ensures basal immunity upon pathogen-induced depletion of BAK1. EMBO J, 35: 46-61 (2016)

39. Sreekanta S, Bethke G, Hatsugai N, Tsuda K, Thao A, Wang L, Katagiri F, Glazebrook J*: The Receptor-Like Cytoplasmic Kinase PCRK1 Contributes to Pattern-Triggered Immunity against Pseudomonas syringae in Arabidopsis thaliana. New Phytol, 207: 78-90 (2015)

38. Cui H, Tsuda K, Parker JE*: Effector-Triggered Immunity: From Pathogen Perception to Robust Defense. Annu Rev Plant Biol, 66: 487-511 (2015)

37. Mateos JL, Madrigal P, Tsuda K, Richter R, Rawat V, Romera-Branchat M, Fornara F, Schneeberger K, Krajewski P, Coupland G*: Decoded combinatorial activities of SHORT VEGETATIVE PHASE and FLOWERING LOCUS C define distinct modes of flowering regulation in Arabidopsis. Genome Biol, 16: 31 (2015)

36. Tsuda K*, Somssich IE*: Transcriptional networks in plant immunity. New Phytol, 206: 932-947 (2015)

35. Anver S, Tsuda K*: Ethylene and Plant Immunity. In Ethylene in Plants. Ed.: Chi-Kuang Wen. Springer, Dordrecht Heidelberg New York London, 205-221 (2015)

34. Seyfferth C, Tsuda K*: Salicylic acid signal transduction: the initiation of biosynthesis, perception and transcriptional reprogramming. Front Plant Sci, 5: 697 (2014)

33. Mine A, Sato M, Tsuda K*: Toward a systems understanding of plant--microbe interactions. Front Plant Sci, 5: 423 (2014)

32. Kim Y, Tsuda K, Igarashi D, Hillmer RA, Sakakibara H, Myers CL, Katagiri F*: Mechanisms underlying robustness and tunability in a plant immune signaling network. Cell Host & Microbe, 15: 84-94 (2014)

31. Ross A, Yamada K, Hiruma K, Yamashita-Yamada M, Lu Xunli, Takano Y, Tsuda K, Saijo Y*: The Arabidopsis PEPR pathway couples local and systemic plant immunity. EMBO J, 33: 62-75 (2014)

30. Tsuda K*, Mine A, Bethke G, Igarashi D, Botanga CJ, Tsuda Y, Glazebrook J, Sato M, Katagiri F: Dual regulation of gene expression mediated by extended MAPK activation and salicylic acid contributes to robust innate immunity in Arabidopsis thaliana. PLoS Genet, 9: e1004015 (2013)

29. Truman W, Sreekanta S, Lu Y, Bethke G, Tsuda K, Katagiri F, Glazebrook J*: The Calmodulin Binding Protein 60 Family Includes Both Negative and Positive Regulators of Plant Immunity. Plant Physiol, 163: 1741-1751 (2013)

28. Heidrich K, Tsuda K, Blanvillain-Baufumé S, Wirthmueller L, Bautor J, Parker JE*: Arabidopsis TNL-WRKY domain receptor RRS1 contributes to temperature-conditioned RPS4 auto-immunity. Front Plant Sci, 4: 403 (2013)

27. Tintor N, Ross A, Kanehara K, Yamada K, Fan L, Kemmerling B, Nurnberger T, Tsuda K, Saijo Y*: Layered pattern receptor signaling via ethylene and endogenous elicitor peptides during Arabidopsis immunity to bacterial infection. Proceedings of the National Academy of Sciences USA, 110: 6211-6216 (2013)

26. Igarashi D, Bethke G, Xu Y, Tsuda K, Glazebrook J, Katagiri F*: Pattern-Triggered Immunity Suppresses Programmed Cell Death Triggered by Fumonisin B1. PLoS One, 8: e60769 (2013)

25. Igarashi D, Tsuda K, Katagiri F*: The Peptide Growth Factor, Phytosulfokine, Attenuates Pattern-Triggered Immunity. Plant J, 71: 194-204 (2012)

24. Di Mauro MF, Iglesias MJ, Arce DP, Valle EM, Arnold RB, Tsuda K, Yamazaki K, Casalongue CA* and Godoy AV: MBF1s regulate ABA-dependent germination of Arabidopsis seeds. Plant Sig Behav, 7: 188-192 (2012)

23. Bethke G, Pecher P, Eschen-Lippold L, Tsuda K, Katagiri F, Glazebrook J, Scheel D, Lee J*: Activation of the Arabidopsis thaliana mitogen-activated protein kinase MPK11 by the flagellin-derived elicitor peptide, flg22. Mol Plant-Microbe Interact, 25: 471-480 (2012)

22. Tsuda K, Qi Y, Nguyen LV, Bethke G, Tsuda Y, Glazebrook J, Katagiri F*: An efficient Agrobacterium-mediated transient transformation of Arabidopsis. Plant J, 69: 713-719 (2012)

21. Willmann R, Lajunena HM, Erbsb G, Newman M, Kolb D, Tsuda K, Katagiri F, Fliegmann J, Bono J, Cullimore JV, Jehle AK, Gotz F, Kulikh A, Molinaroi A, Lipka V, Gust AA*, Nurnberger T*: The Arabidopsis LYM1 LYM3 CERK1 pattern recognition system mediates bacterial peptidoglycan sensing and immunity to bacterial infection. Proceedings of the National Academy of Sciences USA, 108: 19824-19829 (2011)

20. Qi Y, Tsuda K, Nguyen LV, Wang X, Lin J, Murphy AS, Glazebrook J, Thordal-Christensen H, Katagiri F*: Physical association of Arabidopsis hypersensitive induced reaction proteins (HIRs) with the immune receptor RPS2. J Biol Chem, 286: 31297-31307 (2011)

19. Wang L, Tsuda K, Truman W, Sato M, Nguyen LV, Katagiri F, Glazebrook J*: CBP60g and SARD1 play partially redundant, critical roles in salicylic acid signaling. Plant J, 67: 1029-1041 (2011)

18. Qi Y, Tsuda K, Glazebrook J, Katagiri F*: Physical association of PTI and ETI immune receptors in Arabidopsis. Mol Plant Pathol, 12: 702-708 (2011)

17. Wen Y, Wang W, Feng J, Luo MC, Tsuda K, Katagiri F, Bauchan G, Xiao S*: Identification and utilization of a sow thistle powdery mildew as a nonhost pathogen to dissect post-invasion resistance mechanisms in Arabidopsis. J Exp Bot, 62: 2117-2129 (2011)

16. Katagiri F*, Tsuda K: Understanding the plant immune system. Mol Plant-Microbe Interact, 23: 1531-1536 (2010)

15. Qi Y, Tsuda K, Joe A, Sato M, Nguyen LV, Glazebrook J, Alfano JR, Cohen JD, Katagiri F*: A putative RNA-binding protein positively regulates salicylic acid-mediated immunity in Arabidopsis. Mol Plant-Microbe Interact, 23: 1573-1583 (2010)

14. Tsuda K, Katagiri F*: Comparing signaling mechanisms engaged in pattern-triggered and effector-triggered immunity. Curr Opin Plant Biol, 13: 459-465 (2010)

13. Sato M, Tsuda K, Wang L, Coller J, Watanabe Y, Glazebrook J, Katagiri F*: Network modeling reveals prevalent negative regulatory relationships between signaling sectors in Arabidopsis immune signaling. PLoS Pathogens, 6: e1001011 (2010)

12. Ace DP, Godoy AV, Tsuda K, Yamazaki K, Valle EM, Mauro MFD, Iglesias MJ, Casalongue CN*: The analysis of an Arabidopsis triple knock-down mutant reveals functions for MBF1 genes under oxidative stress conditions. J Plant Physiol, 167: 194-200 (2010)

11. Tsuda K, Sato M, Stoddard T, Glazebrook J, Katagiri F*: Network properties of robust immunity in plants. PLoS Genet, 5: e1000772 (2009)

10. Wang L, Tsuda K, Sato M, Cohen JD, Katagiri F, Glazebrook J*: Arabidopsis CaM binding protein CBP60g contributes to MAMP-induced SA accumulation and is involved in disease resistance against Pseudomonas syringae. PLoS Pathogens, 5: e1000301 (2009)

9. Tojo T, Tsuda K, Yoshizumi T, Ikeda A, Yamaguchi J, Matsui M, Yamazaki K*: Arabidopsis MBF1s control leaf cell cycle and its expansion. Plant Cell Physiol, 50: 254-264 (2009)

8. Tsuda K, Glazebrook J, Katagiri F*: The interplay between MAMP and SA signaling. Plant Sig Behav, 3: 359-361 (2008)

7. Tsuda K, Sato M, Glazebrook J, Cohen JD, Katagiri F*: Interplay between MAMP-triggered and SA-mediated defense responses. Plant J, 53: 763-775 (2008)

6. Tojo T, Tsuda K, Wada T, Yamazaki K*: A simple and extremely sensitive system for detecting estrogenic activity using transgenic Arabidopsis thaliana. Ecotoxicol Environ Safety, 64: 106-114 (2006)

5. Sugikawa Y, Ebihara S, Tsuda K, Niwa Y, Yamazaki K*: Transcriptional coactivator MBF1s from Arabidopsis predominantly localize in nucleolus. J Plant Res, 118: 431-437 (2005)

4. Tojo T, Tsuda K, Wada T, Yamazaki K*: Development of a system for monitoring estrogenic activity using transgenic Arabidopsis thaliana. J Environ Biotechnol, 5: 31-36 (2005)

3. Tojo T, Tsuda K, Wada T, Yamazaki K*: A transgenic plant that detects estrogenic activity. Waste Management Res, 15: 247-253 (2004)

2. Tsuda K*, Yamazaki K: Structure and expression analysis of three subtypes of Arabidopsis MBF1 genes. BBA-Gene Regulatory Mechanisms, 1680: 1-10 (2004)

1. Tsuda K*, Tsuji T, Hirose S, Yamazaki K: Three Arabidopsis MBF1 homologs with distinct expression profiles play roles as transcriptional co-activators. Plant Cell Physiol, 45: 225-231 (2004)